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Study

Study Name: Genomic survey of white-rot, wood-decaying shiitake mushrooms

Projects

Biosamples

Organisms

Biosamples: 0 Seq. Projects: 107
STUDY INFORMATION
GOLD Study ID Gs0128791
Study Name Genomic survey of white-rot, wood-decaying shiitake mushrooms
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
SRA Study Id SRP228337  (Link to NCBI )
Study Title Lentinula boryana TFB10827 Standard Draft genome sequencing
Study Abstract
  
SRA Study Id SRP231326  (Link to NCBI )
Study Title Lentinula edodes TMI1633 Minimal Draft genome sequencing
Study Abstract
  
SRA Study Id SRP137462  (Link to NCBI )
Study Title Lentinula raphanica INPA1701G ss19 transcriptome - INPA1701Gss19-R
Study Abstract
  
SRA Study Id SRP164343  (Link to NCBI )
Study Title Lentinula afn. lateritia sp2 HRB7682 ss15 Standard Draft genome sequencing
Study Abstract
  
SRA Study Id SRP138430  (Link to NCBI )
Study Title Lentinula afn. lateritia sp2 HRB7682 ss15 transcriptome - HRB7682ss15-R
Study Abstract
  
SRA Study Id SRP137463  (Link to NCBI )
Study Title Lentinula lateritia RHP3577 ss4 transcriptome - RHP3577ss4-R
Study Abstract
  
SRA Study Id SRP137442  (Link to NCBI )
Study Title Lentinula edodes Le(Bin) 0899 ss11 Standard Draft genome sequencing
Study Abstract
  
SRA Study Id SRP224370  (Link to NCBI )
Study Title Lentinula raphanica JLM1587 Minimal Draft genome sequencing
Study Abstract
  
SRA Study Id SRP137443  (Link to NCBI )
Study Title Lentinula edodes Le(Bin) 0899 ss11 transcriptome - Le(Bin)0899ss11-R
Study Abstract
  
SRA Study Id SRP256620  (Link to NCBI )
Study Title Lentinula boryana TFB7810 ss12 Transcriptome - 7810R
Study Abstract
  
SRA Study Id SRP183737  (Link to NCBI )
Study Title Lentinula novae-zelandieae TMI-1172 Minimal Draft genome sequencing
Study Abstract
  
SRA Study Id SRP219544  (Link to NCBI )
Study Title Lentinula afn. boryana ET3784 Standard Draft genome sequencing
Study Abstract
  
SRA Study Id SRP183742  (Link to NCBI )
Study Title Lentinula afn. lateritia sp 3 TMI1502 Minimal Draft genome sequencing
Study Abstract
  
SRA Study Id SRP280520  (Link to NCBI )
Study Title Lentinula edodes CS-560 Transcriptome - CS-560-R
Study Abstract
  
SRA Study Id SRP194528  (Link to NCBI )
Study Title Lentinula raphanica TFB8682 Transcriptome - TFB8682-R
Study Abstract
  
SRA Study Id SRP228336  (Link to NCBI )
Study Title Lentinula boryana TFB10291 Transcriptome - TFB10291-R
Study Abstract
  
SRA Study Id SRP231317  (Link to NCBI )
Study Title Lentinula boryana TFB7810 ss12 Standard Draft genome sequencing
Study Abstract
  
SRA Study Id SRP224364  (Link to NCBI )
Study Title Lentinula edodes TMI1148 Minimal Draft genome sequencing
Study Abstract
  
SRA Study Id SRP231318  (Link to NCBI )
Study Title Lentinula afn. boryana ET3784 Transcriptome - ET3784-R
Study Abstract
  
SRA Study Id SRP228503  (Link to NCBI )
Study Title Lentinula edodes CS-584 Standard Draft genome sequencing
Study Abstract
  
SRA Study Id SRP194526  (Link to NCBI )
Study Title Lentinula raphanica INPA1820 Minimal Draft genome sequencing
Study Abstract
  
SRA Study Id SRP194527  (Link to NCBI )
Study Title Lentinula raphanica INPA1820 Transcriptome - INPA1820-R
Study Abstract
  
SRA Study Id SRP137451  (Link to NCBI )
Study Title Lentinula raphanica INPA1701G ss19 Standard Draft genome sequencing
Study Abstract
  
SRA Study Id SRP137452  (Link to NCBI )
Study Title Lentinula lateritia RHP3577 ss4 Standard Draft genome sequencing
Study Abstract
  
SRA Study Id SRP231319  (Link to NCBI )
Study Title Lentinula afn. boryana ET3784 Transcriptome - ET3784R
Study Abstract
  
SRA Study Id SRP228508  (Link to NCBI )
Study Title Lentinula edodes CS-584 Transcriptome - CS-584-R
Study Abstract
  
SRA Study Id SRP293200  (Link to NCBI )
Study Title Lentinula boryana TFB10292 Transcriptome - 10292R
Study Abstract
  
SRA Study Id SRP232981  (Link to NCBI )
Study Title Lentinula afn. boryana TFB7829 Transcriptome - TFB7829R-alt
Study Abstract
  
SRA Study Id SRP232980  (Link to NCBI )
Study Title Lentinula afn. boryana TFB7829 Transcriptome - TFB7829R
Study Abstract
  
SRA Study Id SRP231333  (Link to NCBI )
Study Title Lentinula edodes VB361 Transcriptome - VB361R
Study Abstract
  
SRA Study Id SRP239698  (Link to NCBI )
Study Title Lentinula boryana TFB10291 Standard Draft genome sequencing
Study Abstract
  
SRA Study Id SRP183612  (Link to NCBI )
Study Title Lentinula raphanica TFB8682 Minimal Draft genome sequencing
Study Abstract
  
SRA Study Id SRP183615  (Link to NCBI )
Study Title Lentinula raphanica TFB9929 ss4 Minimal Draft genome sequencing
Study Abstract
  
SRA Study Id SRP284377  (Link to NCBI )
Study Title Lentinula novae-zelandiae RHP7563 Transcriptome - 7563R
Study Abstract
  
SRA Study Id SRP280394  (Link to NCBI )
Study Title Lentinula boryana TFB10292 Standard Draft genome sequencing
Study Abstract
  
SRA Study Id SRP224748  (Link to NCBI )
Study Title Lentinula raphanica TFB9207 Transcriptome - TFB9207-R
Study Abstract
  
SRA Study Id SRP224724  (Link to NCBI )
Study Title Lentinula afn. boryana TFB7829 Minimal Draft genome sequencing
Study Abstract
  
SRA Study Id SRP228340  (Link to NCBI )
Study Title Lentinula boryana TFB10827 Transcriptome - TFB10827-R
Study Abstract
  
SRA Study Id SRP224723  (Link to NCBI )
Study Title Lentinula raphanica TFB9207 Minimal Draft genome sequencing
Study Abstract
  
SRA Study Id SRP224369  (Link to NCBI )
Study Title Lentinula raphanica JLM1587 Transcriptome - JLM1587-R
Study Abstract
  
SRA Study Id SRP224366  (Link to NCBI )
Study Title Lentinula edodes VB361 Minimal Draft genome sequencing
Study Abstract
  
SRA Study Id SRP224367  (Link to NCBI )
Study Title Lentinula lateritia TMI1499 Minimal Draft genome sequencing
Study Abstract
  
Legacy ER Study ID
Legacy GOLD ID
Added By JGI automated process on 2017-03-07
Last Modified By JGI automated process on 2019-09-06
PI David S. Hibbett
Description Comparative and functional genomics of shiitake mushrooms to resolve evolutionary relationships, substrate specificity, growth profiles, and routes to domestication in the amphi-Pacific genus Lentinula
Relevance
Study Information Link
Study Information Visibility Public
Metagenomic Study No
Publication
Is GEBA
Is HMP
ECOSYSTEM CLASSIFICATION
Ecosystem
Ecosystem Category
Ecosystem Type
Ecosystem Subtype
Specific Ecosystem
STUDY COMPOSITION
Number of Biosamples 0
Number of Organisms 29
Number of Seq Projects 107
Number of Analysis Projects 8
Number of Related Studies 0

 

 

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