The following elements will have their visibility changed, please review the list before confirming the visibility change

Study

Study Name: Forest soil microbial communities from Duke University, North Carolina, USA, analyzing symbiotic ectomycorrhizal fungi, Suillus, from Pinus spp.

Projects

Biosamples

Organisms

Biosamples: 211 Seq. Projects: 224
STUDY INFORMATION
GOLD Study ID Gs0111539
Study Name Forest soil microbial communities from Duke University, North Carolina, USA, analyzing symbiotic ectomycorrhizal fungi, Suillus, from Pinus spp.
Other Names Integrated genomic/transcriptomic/secretomic study of plant-fungal interactions between pines and their symbiotic ectomycorrhizal fungi in the mushroom genus Suillus
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
SRA Study Id SRP085357  (Link to NCBI )
Study Title Suillus hirtellus EM16 Standard Draft genome sequencing
Study Abstract
  
SRA Study Id SRP105828  (Link to NCBI )
Study Title Suillus pictus EM44 Transcriptome
Study Abstract
  
SRA Study Id SRP105907  (Link to NCBI )
Study Title Suillus decipiens EM49 Transcriptome
Study Abstract
  
SRA Study Id SRP105818  (Link to NCBI )
Study Title Suillus americanus EM31 Transcriptome
Study Abstract
  
SRA Study Id SRP105906  (Link to NCBI )
Study Title Suillus hirtellus EM16 Transcriptome
Study Abstract
  
SRA Study Id SRP085360  (Link to NCBI )
Study Title Suillus pictus EM44 Standard Draft genome sequencing
Study Abstract
  
SRA Study Id SRP137687  (Link to NCBI )
Study Title Suillus cothurnatus VC 1858 transcriptome - S.co_VC1858_R3
Study Abstract
  
SRA Study Id SRP085363  (Link to NCBI )
Study Title Suillus decipiens EM49 Standard Draft genome sequencing
Study Abstract
  
SRA Study Id SRP105822  (Link to NCBI )
Study Title Suillus granulatus EM37 Transcriptome
Study Abstract
  
SRA Study Id SRP085366  (Link to NCBI )
Study Title Suillus granulatus EM37 Standard Draft genome sequencing
Study Abstract
  
SRA Study Id SRP135626  (Link to NCBI )
Study Title Suillus cothurnatus VC 1858 Standard Draft genome sequencing
Study Abstract
  
SRA Study Id SRP085365  (Link to NCBI )
Study Title Suillus americanus EM31 Standard Draft genome sequencing
Study Abstract
  
Legacy ER Study ID 79374
Legacy GOLD ID Gm0079374
Added By Michelle Isbandi on 2014-10-03
Last Modified By JGI automated process on 2019-06-18
PI Rytas Vilgalys
Description This is an integrated -omic study of symbiotic interactions between pines (Pinus spp.) and their ectomycorrhizal fungi (EMF) in the genus Suillus. The study aims to develop the Pine-Suillus symbiosis as a model for understanding EMF function across diverse pine dominated forests of North America, including how symbiotic fungi utilize and sequester plant-derived Carbon.
Relevance
Study Information Link
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA No
Is HMP No
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Terrestrial
Ecosystem Type Soil
Ecosystem Subtype Unclassified
Specific Ecosystem Forest soil
STUDY COMPOSITION
Number of Biosamples 211
Number of Organisms 8
Number of Seq Projects 224
Number of Analysis Projects 1
Number of Related Studies 0

 

 

  You are going to add the following user to ALL Sequencing Projects, Biosamples and Analysis Projects that
sit under this study (a cascading permission update).

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to all Sequencing Projects,
Biosamples and Analysis Projects under this study.

 

Contact Name/Email:

Do you want to continue?