PROJECT INFORMATION
GOLD Project ID
Gp0332789  
Project Name
Ganoderma sp. 10597 SS1 EST - Gansp_lignin  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Ganoderma sp. 10597 SS1 EST - Gansp_lignin
NCBI BioProject ID 584587
NCBI BioProject Accession PRJNA584587
NCBI Locus Tag
  
NCBI BioSample Accession SAMN13171970
PI Igor Grigoriev
Added By JGI automated process on 2018-10-04
Last Modified By JGI automated process on 2019-11-04
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Ganoderma sp. 10597 SS1 expressed sequence tag (EST). mycelium grown in liquid media containing lignin, hemicellulose and crystalline cellulose  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid RNA
Sequencing Strategy
Transcriptome  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study SAP - Community proposal to sequence a diverse assemblage of saprotrophic Basidiomycota (Agaricomycotina)
Organism Ganoderma sp. 10597 SS1
Analysis Projects
  
Number of Analysis Projects (AP)
0  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) 454 GS FLX Titanium
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0009715
Organism Name
Ganoderma sp. 10597 SS1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-BASIDIOMYCOTA  
Genus
Ganoderma  
Genus Synonyms
  
Species
Ganoderma sp. 10597 SS1  
Subspecies
  
Species Synonyms
  
Strain
10597 SS1  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 767862
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Basidiomycota  
NCBI Class
Agaricomycetes  
NCBI Order
Polyporales  
NCBI Family
Polyporaceae  
NCBI Genus
Ganoderma  
NCBI Species
Ganoderma sp. 10597 SS1  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats
  
Metabolisms
  
Phenotypes Anti-inflammatory activity
Energy Sources
  

 

 

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