PROJECT INFORMATION
GOLD Project ID
Gp0235934  
Project Name
Trichosporon asahii JCM 2466  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Trichosporon asahii JCM 2466 Genome Sequencing
NCBI BioProject ID 356936
NCBI BioProject Accession PRJDB3696
NCBI Locus Tag
  
NCBI BioSample Accession SAMD00028417
PI
Added By JGI automated process on 2017-08-31
Last Modified By JGI automated process on 2017-09-01
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center RIKEN (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
Trichosporon asahii JCM 2466 Genome Sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id DRX029373  (Link to NCBI )
Experiment Title Illumina HiSeq 2500 paired end sequencing of SAMD00028417
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
Spot Length 302
 
SRA Experiment Id DRX033292  (Link to NCBI )
Experiment Title Illumina HiSeq 2500 paired end sequencing of SAMD00028417
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
Spot Length 302
 
SRA Experiment Id DRX038335  (Link to NCBI )
Experiment Title Illumina MiSeq paired end sequencing of SAMD00028417
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
Spot Length 602
PROJECT COMPOSITION
Study Genome and transcriptome sequencing of Trichosporon asahii JCM 2466
Organism Trichosporon asahii JCM 2466
Analysis Projects Trichosporon asahii JCM 2466
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
  
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0384808
Organism Name
Trichosporon asahii JCM 2466  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-BASIDIOMYCOTA  
Genus
Trichosporon  
Genus Synonyms
  
Species
Trichosporon asahii  
Subspecies
  
Species Synonyms
  
Strain
JCM 2466  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 82508
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Basidiomycota  
NCBI Class
Tremellomycetes  
NCBI Order
Trichosporonales  
NCBI Family
Trichosporonaceae  
NCBI Genus
Trichosporon  
NCBI Species
Trichosporon asahii  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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