PROJECT INFORMATION
GOLD Project ID
Gp0235566  
Project Name
Polyporus brumalis kfri 20912  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Polyporus brumalis kfri 20912 Genome Sequencing
NCBI BioProject ID 326027
NCBI BioProject Accession PRJNA326027
NCBI Locus Tag
  
NCBI BioSample Accession SAMN05256995
PI
Added By JGI automated process on 2017-08-31
Last Modified By Hema Katta on 2019-02-14
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center National Institute of Forest Science
Collaborating Institute
  
Funding Agency
  
Project Description
Polyporus brumalis kfri 20912 Genome Sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Whole-Genome Sequencing of the Wood Rot Fungus , Which Exhibits Potential Terpenoid Metabolism.

Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX2788506  (Link to NCBI )
Experiment Title Whole genome seq of wood rot fungus
SRA Submission ID 4022424
Submitter suyeon lee (goodday8508@korea.kr)
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM PCR
Library Name 139420
Library Layout PAIRED
Library Instrument PacBio RS
PROJECT COMPOSITION
Study Polyporus brumalis kfri 20912 Genome sequencing and assembly
Organism Polyporus brumalis kfri 20912
Analysis Projects Polyporus brumalis kfri 20912
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
  
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) PacBio RS
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0384460
Organism Name
Polyporus brumalis kfri 20912  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-BASIDIOMYCOTA  
Genus
Polyporus  
Genus Synonyms
  
Species
Polyporus brumalis  
Subspecies
  
Species Synonyms
  
Strain
kfri 20912  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 139420
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Basidiomycota  
NCBI Class
Agaricomycetes  
NCBI Order
Polyporales  
NCBI Family
Polyporaceae  
NCBI Genus
Polyporus  
NCBI Species
Polyporus brumalis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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