PROJECT INFORMATION
GOLD Project ID
Gp0017841  
Project Name
Postia placenta Mad-698-R  
Other Names
  
Legacy ER Project ID
23044  
Legacy GOLD ID
Gc00946, Gi0023044  
NCBI BioProject Name Postia placenta Mad-698-R
NCBI BioProject ID 19789
NCBI BioProject Accession PRJNA19789
NCBI Locus Tag
POSPL  
NCBI BioSample Accession SAMN00113321
PI Daniel Cullen
Added By JGI automated process on 2012-02-08
Last Modified By Tatiparthi Reddy on 2017-08-31
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Bioenergy
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Forest Products Laboratory, U.S. Forest Service, U.S. Department of Agriculture
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
WGS sequencing, assembly, and annotation  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America 106(6):1954-9 Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Postia placenta
Organism Postia placenta Mad-698-R
Analysis Projects Postia placenta Mad-698-R
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal Level 6: Finished
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
approximately 3 kb and 8 kb inserts  
Library Layout
  
Library Screening Method
  
Number Of Reads
574631  
Read Size
  
Vector
  
GC Percent
54  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0017841
Organism Name
Postia placenta Mad-698-R  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-BASIDIOMYCOTA  
Genus
Postia  
Genus Synonyms
  
Species
Postia placenta  
Subspecies
  
Species Synonyms
  
Strain
Mad-698-R  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 104341
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Basidiomycota  
NCBI Class
Agaricomycetes  
NCBI Order
Polyporales  
NCBI Family
Dacryobolaceae  
NCBI Genus
Postia  
NCBI Species
Postia placenta  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms Cellulose degrader
Phenotypes Brown-rot
Energy Sources
  

 

 

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